Du Lab -- Publication

Du Lab Research
Computational Mass Spectrometry

Publication

Chowdhury, S. M.; Du, X.; Tolic, N.; Wu, S.; Moore, R. J.; Mayer-Cumblidge, U.; Smith, R. D.; Adkins, J. N. (2008) Identification of cross-linked peptides containing a CLICK-based enrichment group using sequential CID and ETD tandem mass spectrometry, Journal of the American Chemical Society, in revision.

Ding, S.; Wang, Y.; Jacobs, J. M.; Qian, W.; Yang, F.; Tolmachev, A. V.; Du, X.; Wang, W.; Moore, R. J.; Monrow, M. E.; Purvine, S. O.; Waters, K.; Heibeck, T. H.; Adkins, J. N.; Camp, D. G., II; Klemke, R. L.; Smith, R. D. (2008) Quantitative Phosphoproteome Analysis of Lysophosphatidic Acid Induced Chemotaxis Applying Dual-Step 18O Labeling Coupled with Immobilized Metal-Ion Affinity Chromatography, J. of Proteome Res., 7(10); 4215-4224.

Du, X.; Callister, S. J.; Manes, N. P.; Adkins, J. N.; Alexandridis, R. A.; Zeng, X.; Roh, J. H.; Smith, W. E.; Donohue, T. J.; Kaplan, S.; Smith, R. D.; Lipton, M. S. (2008) A Computational Strategy to Analyze Label-Free Temporal Bottom-up Proteomics Data, J. of Proteome Res., 7(7), 2595-2604.

Du, X.; Yang, F.; Manes, N. P.; Stenoien, D. L.; Monroe, M. E.; Adkins, J. N.; States, D. J.; Purvine, S. O.; Camp, D. G., II; Smith, R. D. (2008) Linear Discriminant Analysis-Based Estimation of False Discovery Rate for Phosphopeptide Identifications, J of Proteome Res. 7(6), 2195-2203.

Manes, N. P.; Estep, R. D.; Mottaz, H. M.; Moore, R. J.; Clauss, T. R. W.; Monroe, M. E.; Du, X.; Adkins, J. N.; Wong, S. W.; Smith, R. D. (2008) Comparative Proteomics of Human Monkeypox and Vaccinia Intracellular Mature and Extracellular Enveloped Virions, J. of Proteome Res., 7(3), 960-968.

Yang, F.; Jaitly, N.; Jayachandran, H.; Luo, Q.; Monroe, M. E.; Du, X.; Gritsenko, M. A.; Zhang, R.; Anderson, D. J.; Purvine, S. O.; Adkins, J. N.; Moore, R. J.; Mottaz, H. M.; Ding, S.-J.; Lipton, M. S.; Camp, D. G., II; Udseth, H. R.; Smith, R. D.; Rossie, S. (2007) Applying a Targeted Label-free Approach using LC-MS AMT tags to Evaluate Changes in Protein Phosphorylation Following Phosphatase Inhibition, J. of Proteome Res., 6(11), 4489-4497.

Du, X.; Ghosh, B.K.; Ulinski, P. (2006) Encoding of Motion Targets by Waves in Turtle Visual Cortex, IEEE Transactions on Biomedical Engineering, vol. 53, No. 8, pp.1688-1695.

Du, X.; Ghosh, B.K.; Ulinski, P. (2005) Encoding and Decoding Target Locations with Waves in the Turtle Visual Cortex, IEEE Transactions on Biomedical Engineering, vol. 52, No. 4, pp. 566-577.

Du, X.; Ghosh, B.K. (2003) Information-Theoretic Analysis of Turtle Cortical Waves, Proceedings of the 42nd IEEE Conference on Decision and Control, pp. 6423--6428.

Du, X.; Ni, S. (1999) Analysis and Design of Variable Speed Constant Frequency (VSCF) Pump Storage System, Advanced Technology of Electrical Engineering and Energy, ISSN 1003-3076, Issue 3, pp. 13-17.

Ding, Y.; Du, X. (1998) Design of the Triggering Circuit for the Inverter in a VSCF Wave Power Station, Power Electronics, ISSN 1000-100x, No. 2, pp. 76-78.

Du, X.; Li, K; Ni, S. (1997) Research on the Control and Protection System for the VSCF Wave Power Station, Advanced Technology of Electrical Engineering and Energy, ISSN 1003-3076, Issue 2, pp. 56-59.

Li, K.; Du, X. (1997) R&D of the Controller for a VSCF Wave Power Station based on the 89c51 Microprocessor, Power Electronics, ISSN 1000-100x, No.3, pp. 55-57.