PCL results for AraCyc pathway: tRNA charging pathway

KEY: Each row represents a single gene that was identified by PLC (pathway-level co-expression) as being co-expressed with two or more genes in this pathway. Column 2 lists probe sets/genes that are co-expressed with annotated pathway members in column 3. Here, co-expression is defined as a regression p value less than 1e-120. If a gene in the first column is shaded blue, then it is already known to be a member of the pathway.

rank

probe set:gene id

co-expressed with

249993_at : AT5G18570
GO:0008121:ubiquinol-cytochrome-c reductase activity
GO:0006122:mitochondrial electron transport, ubiquinol to cytochrome c
GO:0005524:ATP binding
GO:0009507:chloroplast
GO:0006412:protein biosynthesis
GO:0006118:electron transport
GO:0005525:GTP binding

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.799	3.28e-149	0.753	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.701	8.51e-160	0.777	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.663	9.71e-177	0.81	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.853	5.18e-168	0.794	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251807_at AT3G55400	0.846	1.23e-122	0.682	step: isoleucine-tRNA ligase//leucine-tRNA ligase GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004817:cysteine-tRNA ligase activity GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0009228:thiamin biosynthesis GO:0006438:valyl-tRNA aminoacylation GO:0005739:mitochondrion GO:0006429:leucyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0005524:ATP binding GO:0006423:cysteinyl-tRNA aminoacylation
264350_at AT1G11870	0.626	2.06e-132	0.711	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.978	1.49e-194	0.84	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.669	5.57e-149	0.753	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.817	2.62e-183	0.822	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.617	3.45e-144	0.741	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.685	1.79e-132	0.711	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.953	2.15e-144	0.742	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

252122_at : AT3G51140
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009706:chloroplast inner membrane

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	1.07	3.26e-207	0.858	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.864	6.58e-145	0.743	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.786	1.4e-134	0.717	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	1.06	1.63e-154	0.765	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.807	4.3e-144	0.741	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	1.17	3.52e-148	0.751	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.878	4.61e-180	0.816	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.989	1.54e-150	0.756	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.817	2.36e-181	0.818	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.897	2.29e-155	0.767	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	1.17	7.11e-131	0.706	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

258554_at : AT3G06980
GO:0000004:biological process unknown
GO:0008026:ATP-dependent helicase activity
GO:0004386:helicase activity
GO:0003676:nucleic acid binding
GO:0005524:ATP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.689	4.39e-133	0.712	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.599	2.65e-136	0.721	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.553	9.5e-135	0.717	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.709	1.49e-127	0.697	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.552	1.02e-128	0.7	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.813	1.23e-142	0.737	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.576	1.19e-131	0.708	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.701	6.25e-156	0.769	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.541	1.47e-137	0.724	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.603	3.23e-129	0.702	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.817	4.34e-126	0.693	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

267562_at : AT2G39670
GO:0003824:catalytic activity
GO:0005506:iron ion binding
GO:0000004:biological process unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.719	1.83e-175	0.808	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.579	1.1e-128	0.7	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.56	3.24e-154	0.765	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.705	1.54e-134	0.716	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.567	4.42e-156	0.769	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.79	1.6e-137	0.724	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.559	8.91e-127	0.695	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.686	1.03e-154	0.766	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.546	7.13e-156	0.768	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.595	3.56e-132	0.71	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.8	1.85e-125	0.691	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

250383_at : AT5G11480
GO:0000004:biological process unknown
GO:0005525:GTP binding
GO:0003924:GTPase activity
GO:0005524:ATP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.87	3.58e-159	0.776	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.766	3.51e-174	0.805	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.66	2.22e-127	0.696	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.933	1.94e-184	0.824	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.663	3.87e-125	0.69	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	1.01	3.67e-157	0.771	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.724	3.35e-154	0.765	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.855	3.21e-161	0.78	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.674	7.28e-156	0.768	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.769	1.05e-159	0.777	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.981	2.2e-122	0.682	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

261307_at : AT1G48520
GO:0006424:glutamyl-tRNA aminoacylation
GO:0005739:mitochondrion
GO:0017068:glutamyl-tRNA(Gln) amidotransferase activity
GO:0016884:carbon-nitrogen ligase activity, with glutamine as amido-N-donor
GO:0016874:ligase activity
GO:0006412:protein biosynthesis

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.901	1.61e-162	0.783	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.785	8.29e-170	0.797	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.691	3.05e-135	0.718	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.916	9.55e-147	0.747	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.68	3.81e-123	0.684	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	1.06	1.6e-173	0.804	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.723	7.34e-135	0.717	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.879	5.27e-159	0.775	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.67	8.85e-134	0.714	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.791	5.01e-159	0.775	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	1.01	5.31e-121	0.677	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

251193_at : AT3G62910
GO:0005737:cytoplasm
GO:0016149:translation release factor activity, codon specific
GO:0009658:chloroplast organization and biogenesis
GO:0006415:translational termination
GO:0003747:translation release factor activity
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.638	1.33e-186	0.827	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.515	1.74e-137	0.724	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.673	2.13e-202	0.851	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.499	6.19e-137	0.723	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.722	5.9e-166	0.79	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.487	8.52e-150	0.755	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.626	9.55e-188	0.829	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.484	2.15e-164	0.786	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.548	4.21e-164	0.786	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.717	2.18e-137	0.724	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

261540_at : AT1G63610
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.753	5.26e-192	0.836	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.607	4.8e-139	0.728	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.775	3.22e-181	0.818	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.597	1.21e-146	0.747	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.851	7.95e-168	0.793	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.554	1.23e-130	0.706	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.715	8.8e-163	0.783	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.574	3.08e-172	0.802	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.643	2.27e-162	0.782	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.835	1.99e-132	0.711	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

248854_at : AT5G46580
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.625	1.44e-156	0.77	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.53	4.87e-145	0.743	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.69	4.17e-214	0.867	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.502	6.87e-131	0.706	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.744	4.15e-178	0.813	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.489	1.61e-142	0.737	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.638	5.53e-192	0.836	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.477	2.75e-143	0.739	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.542	4.15e-145	0.744	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.72	1.01e-130	0.706	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

247098_at : AT5G66470
GO:0016151:nickel ion binding
GO:0007264:small GTPase mediated signal transduction
GO:0006461:protein complex assembly
GO:0003924:GTPase activity
GO:0003676:nucleic acid binding
GO:0006400:tRNA modification
GO:0009507:chloroplast
GO:0006412:protein biosynthesis
GO:0005524:ATP binding
GO:0005525:GTP binding

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.666	2.74e-141	0.734	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.577	5.37e-143	0.738	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.534	9.61e-142	0.735	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.742	5.35e-196	0.842	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251807_at AT3G55400	0.722	2.95e-127	0.696	step: isoleucine-tRNA ligase//leucine-tRNA ligase GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004817:cysteine-tRNA ligase activity GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0009228:thiamin biosynthesis GO:0006438:valyl-tRNA aminoacylation GO:0005739:mitochondrion GO:0006429:leucyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0005524:ATP binding GO:0006423:cysteinyl-tRNA aminoacylation
248634_at AT5G49030	0.824	8.57e-192	0.835	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.557	8.71e-140	0.73	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.678	2.48e-167	0.792	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.516	2.45e-138	0.726	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.593	3.95e-146	0.746	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast

257759_at : AT3G23070
GO:0006355:regulation of transcription, DNA-dependent
GO:0016564:transcriptional repressor activity
GO:0006928:cell motility
GO:0043064:flagellum organization and biogenesis
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252516_at AT3G46100	0.552	7.36e-130	0.703	step: histidine-tRNA ligase GO:0006427:histidyl-tRNA aminoacylation GO:0004821:histidine-tRNA ligase activity GO:0005739:mitochondrion GO:0009507:chloroplast
258475_at AT3G02660	0.66	2.44e-163	0.784	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.788	1.27e-156	0.77	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248339_at AT5G52520	0.74	2.97e-142	0.736	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.896	9.92e-173	0.803	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.576	3.28e-127	0.696	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.73	1.23e-145	0.745	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.578	1.42e-143	0.74	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.64	6.36e-131	0.706	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.872	3.56e-131	0.707	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

266863_at : AT2G26930
GO:0005737:cytoplasm
GO:0006566:threonine metabolism
GO:0004496:mevalonate kinase activity
GO:0016310:phosphorylation
GO:0016301:kinase activity
GO:0004413:homoserine kinase activity
GO:0009058:biosynthesis
GO:0016114:terpenoid biosynthesis
GO:0005524:ATP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	1.14	9.12e-162	0.781	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.945	5.5e-137	0.723	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	1.16	1.19e-150	0.757	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.92	3.7e-139	0.729	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	1.24	1.9e-126	0.694	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.862	5.36e-129	0.701	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	1.14	6e-180	0.816	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.867	1.52e-147	0.749	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.968	2.04e-138	0.727	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	1.33	1.89e-142	0.737	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

246019_at : AT5G10690
GO:0000004:biological process unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.628	5.94e-126	0.692	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.575	9.89e-160	0.777	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.709	5.13e-179	0.814	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.535	1.6e-134	0.716	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.788	1.89e-177	0.811	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.503	6.58e-126	0.692	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.663	3.34e-173	0.804	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.513	1.3e-152	0.761	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.577	7.24e-148	0.75	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.765	3.87e-132	0.71	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

248094_at : AT5G55220
GO:0015031:protein transport
GO:0006457:protein folding
GO:0003755:peptidyl-prolyl cis-trans isomerase activity
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.447	2.29e-176	0.809	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.384	2.06e-171	0.8	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.333	1.58e-128	0.7	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.473	8.21e-192	0.835	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.334	1.71e-125	0.691	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.519	1.46e-176	0.81	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.367	2.43e-159	0.776	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.44	1.3e-180	0.817	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.331	6.15e-141	0.733	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.395	9.66e-177	0.81	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast

260793_at : AT1G06190
GO:0008017:microtubule binding
GO:0003677:DNA binding
GO:0016055:Wnt receptor signaling pathway
GO:0005515:protein binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.646	1.24e-152	0.761	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.555	1.01e-149	0.755	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.508	3.91e-142	0.736	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.664	7.7e-145	0.743	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.497	2.87e-125	0.69	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.77	3.21e-173	0.804	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.538	2.9e-148	0.751	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.628	7.22e-148	0.75	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.495	4.61e-143	0.738	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.571	2.42e-154	0.765	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast

246509_at : AT5G16715
GO:0005737:cytoplasm
GO:0004825:methionine-tRNA ligase activity
GO:0004812:tRNA ligase activity
GO:0006431:methionyl-tRNA aminoacylation
GO:0004822:isoleucine-tRNA ligase activity
GO:0004823:leucine-tRNA ligase activity
GO:0008270:zinc ion binding
GO:0006438:valyl-tRNA aminoacylation
GO:0006428:isoleucyl-tRNA aminoacylation
GO:0006429:leucyl-tRNA aminoacylation
GO:0005576:extracellular region
GO:0008237:metallopeptidase activity
GO:0006418:tRNA aminoacylation for protein translation
GO:0004832:valine-tRNA ligase activity
GO:0006508:proteolysis and peptidolysis
GO:0006412:protein biosynthesis
GO:0005524:ATP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.859	2.13e-131	0.708	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.745	9.2e-134	0.714	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.74	3.32e-183	0.821	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.971	9.93e-193	0.837	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.692	1.07e-130	0.706	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	1.07	1.63e-179	0.815	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.716	8.07e-129	0.701	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.695	3.37e-154	0.765	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.748	3.93e-125	0.69	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	1.11	3.92e-177	0.811	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

251669_at : AT3G57180
GO:0005634:nucleus
GO:0005525:GTP binding
GO:0000004:biological process unknown
GO:0003676:nucleic acid binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.73	1.9e-157	0.772	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.616	9.36e-142	0.735	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.593	3.25e-168	0.794	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.761	6.97e-159	0.775	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.567	2.91e-133	0.713	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.827	2.47e-142	0.737	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.578	9.96e-125	0.689	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.734	1.41e-177	0.812	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.547	3.31e-134	0.715	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
252404_at AT3G48110	0.83	4.87e-125	0.69	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

256963_at : AT3G13490
GO:0005737:cytoplasm
GO:0004824:lysine-tRNA ligase activity
GO:0004812:tRNA ligase activity
GO:0004815:aspartate-tRNA ligase activity
GO:0006430:lysyl-tRNA aminoacylation
GO:0004816:asparagine-tRNA ligase activity
GO:0006421:asparaginyl-tRNA aminoacylation
GO:0006422:aspartyl-tRNA aminoacylation
GO:0003676:nucleic acid binding
GO:0006418:tRNA aminoacylation for protein translation
GO:0006350:transcription
GO:0003899:DNA-directed RNA polymerase activity
GO:0005524:ATP binding

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	1.13	1.18e-160	0.779	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.948	1.84e-139	0.729	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.855	6.01e-126	0.692	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	1.16	2.12e-149	0.754	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.86	2.24e-124	0.688	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	1.28	3.54e-143	0.739	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.911	1.16e-134	0.717	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	1.1	3.37e-154	0.765	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251573_at AT3G58140	0.951	8.25e-130	0.703	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	1.37	2.05e-165	0.789	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

258048_at : AT3G16290
GO:0005786:signal recognition particle (sensu Eukaryota)
GO:0004176:ATP-dependent peptidase activity
GO:0009378:Holliday junction helicase activity
GO:0004252:serine-type endopeptidase activity
GO:0009377:HslUV protease activity
GO:0009376:HslUV protease complex
GO:0007160:cell-matrix adhesion
GO:0016887:ATPase activity
GO:0003677:DNA binding
GO:0000103:sulfate assimilation
GO:0008237:metallopeptidase activity
GO:0005737:cytoplasm
GO:0005634:nucleus
GO:0016020:membrane
GO:0006510:ATP-dependent proteolysis
GO:0006508:proteolysis and peptidolysis
GO:0005524:ATP binding
GO:0005525:GTP binding
GO:0016787:hydrolase activity
GO:0004222:metalloendopeptidase activity
GO:0006281:DNA repair
GO:0016301:kinase activity
GO:0006614:SRP-dependent cotranslational protein-membrane targeting
GO:0008305:integrin complex
GO:0030163:protein catabolism
GO:0007155:cell adhesion
GO:0009507:chloroplast
GO:0006310:DNA recombination
GO:0008092:cytoskeletal protein binding
GO:0016772:transferase activity, transferring phosphorus-containing groups
GO:0003724:RNA helicase activity
GO:0003723:RNA binding
GO:0005515:protein binding
GO:0015031:protein transport

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.8	2.27e-156	0.77	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.691	2.07e-156	0.77	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.846	1.29e-168	0.795	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.634	2.76e-124	0.687	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.948	5.21e-173	0.803	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.638	2.85e-154	0.765	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.805	4.77e-177	0.811	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.637	4.36e-174	0.805	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.683	1.24e-135	0.719	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.994	3.33e-183	0.821	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

257717_at : AT3G18390
GO:0000004:biological process unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252516_at AT3G46100	0.363	1.76e-133	0.714	step: histidine-tRNA ligase GO:0006427:histidyl-tRNA aminoacylation GO:0004821:histidine-tRNA ligase activity GO:0005739:mitochondrion GO:0009507:chloroplast
258475_at AT3G02660	0.434	9.64e-171	0.799	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.522	5.22e-169	0.796	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248339_at AT5G52520	0.487	5.29e-148	0.75	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.597	3.89e-194	0.839	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.39	4.34e-124	0.687	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.47	4.02e-139	0.728	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.375	1.49e-141	0.735	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.46	1.99e-209	0.861	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.563	1.37e-126	0.694	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

266957_at : AT2G34640
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.46	5.35e-124	0.687	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.41	2.21e-139	0.729	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.398	3.16e-171	0.8	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.504	2.57e-152	0.761	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.372	9.85e-125	0.689	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.567	2.87e-159	0.776	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.389	1.91e-127	0.697	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.48	1.2e-159	0.777	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.369	3.76e-139	0.729	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
252404_at AT3G48110	0.565	1.23e-133	0.714	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

247235_at : AT5G64580
GO:0005737:cytoplasm
GO:0016787:hydrolase activity
GO:0009378:Holliday junction helicase activity
GO:0004222:metalloendopeptidase activity
GO:0005515:protein binding
GO:0006281:DNA repair
GO:0005634:nucleus
GO:0016020:membrane
GO:0030163:protein catabolism
GO:0006310:DNA recombination
GO:0016887:ATPase activity
GO:0003677:DNA binding
GO:0015031:protein transport
GO:0006508:proteolysis and peptidolysis
GO:0005524:ATP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.9	1.4e-144	0.742	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.747	1.91e-123	0.685	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.767	4.02e-196	0.842	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.95	4.1e-154	0.765	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.699	2.27e-124	0.688	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	1.07	2.12e-163	0.784	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.727	3.82e-125	0.69	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.94	9.83e-197	0.843	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.716	5.73e-159	0.775	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
252404_at AT3G48110	1.13	1.98e-175	0.808	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

262086_at : AT1G56050
GO:0000004:biological process unknown
GO:0005525:GTP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.615	3.64e-143	0.739	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.55	8.05e-167	0.791	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.484	5.22e-134	0.715	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.648	4.38e-151	0.758	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
264350_at AT1G11870	0.478	2.57e-123	0.684	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.758	1.76e-190	0.833	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.542	1.69e-180	0.817	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.604	1.43e-144	0.742	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.478	2.31e-142	0.737	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.54	6.13e-140	0.731	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast

262207_at : AT1G74850
GO:0004289:subtilase activity
GO:0006508:proteolysis and peptidolysis
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.669	1.43e-123	0.685	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.616	2.63e-161	0.78	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.738	1.54e-157	0.772	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.559	1.59e-122	0.682	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.847	1.46e-181	0.819	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.539	6.25e-127	0.695	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.706	8.03e-169	0.795	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.555	8.51e-161	0.779	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.59	2e-123	0.685	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.81	3.06e-127	0.696	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

259344_at : AT3G03710
GO:0004549:tRNA-specific ribonuclease activity
GO:0000049:tRNA binding
GO:0008033:tRNA processing
GO:0005840:ribosome
GO:0000175:3'-5'-exoribonuclease activity
GO:0003735:structural constituent of ribosome
GO:0003723:RNA binding
GO:0003676:nucleic acid binding
GO:0006412:protein biosynthesis
GO:0006396:RNA processing
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252516_at AT3G46100	0.522	6.85e-132	0.709	step: histidine-tRNA ligase GO:0006427:histidyl-tRNA aminoacylation GO:0004821:histidine-tRNA ligase activity GO:0005739:mitochondrion GO:0009507:chloroplast
258475_at AT3G02660	0.62	5.11e-162	0.782	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.712	1.76e-132	0.711	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251807_at AT3G55400	0.756	9.29e-129	0.7	step: isoleucine-tRNA ligase//leucine-tRNA ligase GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004817:cysteine-tRNA ligase activity GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0009228:thiamin biosynthesis GO:0006438:valyl-tRNA aminoacylation GO:0005739:mitochondrion GO:0006429:leucyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0005524:ATP binding GO:0006423:cysteinyl-tRNA aminoacylation
264350_at AT1G11870	0.54	3.62e-121	0.678	step: serine-tRNA ligase GO:0006434:seryl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0004828:serine-tRNA ligase activity GO:0006464:protein modification GO:0005739:mitochondrion GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding
248634_at AT5G49030	0.856	4.78e-186	0.826	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.575	1.09e-133	0.714	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.681	1.19e-140	0.732	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.538	3.71e-138	0.726	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.591	7.66e-122	0.68	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast

261206_at : AT1G12800
GO:0005840:ribosome
GO:0005634:nucleus
GO:0008270:zinc ion binding
GO:0006412:protein biosynthesis
GO:0003735:structural constituent of ribosome
GO:0003723:RNA binding
GO:0004332:fructose-bisphosphate aldolase activity
GO:0003677:DNA binding
GO:0006096:glycolysis
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.518	7.52e-153	0.762	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.457	2.52e-168	0.794	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.56	1.75e-184	0.824	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
245413_at AT4G17300	0.367	4.06e-122	0.681	step: asparagine-tRNA ligase GO:0006421:asparaginyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0005739:mitochondrion GO:0009507:chloroplast
248634_at AT5G49030	0.634	2.23e-200	0.848	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.415	4.99e-128	0.698	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.512	7.39e-159	0.775	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.39	2.05e-133	0.713	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.48	5.31e-196	0.842	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.587	5.85e-121	0.677	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

265076_at : AT1G55490
GO:0006457:protein folding
GO:0051085:chaperone cofactor dependent protein folding
GO:0009627:systemic acquired resistance
GO:0005515:protein binding
GO:0008219:cell death
GO:0005525:GTP binding
GO:0005524:ATP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.42	9.57e-148	0.75	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.364	4.71e-149	0.753	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.455	4.41e-178	0.813	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.352	8.37e-147	0.748	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.505	1.52e-173	0.804	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.327	3.74e-132	0.71	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.421	2.58e-162	0.782	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.32	3.06e-134	0.716	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.365	6.47e-138	0.725	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast

248075_at : AT5G55740
GO:0006259:DNA metabolism
GO:0004527:exonuclease activity
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.634	6.55e-147	0.748	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.582	4.59e-198	0.845	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.689	3.73e-180	0.816	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.776	3.29e-191	0.835	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.523	1.09e-137	0.725	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.643	5.79e-172	0.801	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.488	7.99e-141	0.733	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.563	1.08e-151	0.759	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.742	6.47e-132	0.709	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

248634_at : AT5G49030
GO:0005737:cytoplasm
GO:0004825:methionine-tRNA ligase activity
GO:0004812:tRNA ligase activity
GO:0006431:methionyl-tRNA aminoacylation
GO:0004822:isoleucine-tRNA ligase activity
GO:0004823:leucine-tRNA ligase activity
GO:0006438:valyl-tRNA aminoacylation
GO:0006428:isoleucyl-tRNA aminoacylation
GO:0006429:leucyl-tRNA aminoacylation
GO:0008270:zinc ion binding
GO:0006418:tRNA aminoacylation for protein translation
GO:0004832:valine-tRNA ligase activity
GO:0006412:protein biosynthesis
GO:0005524:ATP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.733	1.65e-136	0.722	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.658	1.19e-161	0.781	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.581	2.56e-131	0.708	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
255328_at AT4G04350	0.821	2.26e-193	0.838	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
251442_at AT3G59980	0.623	2.8e-145	0.744	step: methionine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0000049:tRNA binding GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
246509_at AT5G16715	0.763	1.63e-179	0.815	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.577	3.54e-143	0.739	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.668	1.2e-156	0.77	step: phenylalanine-tRNA ligase GO:0005737:cytoplasm GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0005524:ATP binding GO:0009507:chloroplast
252404_at AT3G48110	0.878	1.72e-134	0.716	step: glycine-tRNA ligase GO:0004820:glycine-tRNA ligase activity GO:0045995:regulation of embryonic development GO:0009507:chloroplast

255447_at : AT4G02790
GO:0000004:biological process unknown
GO:0005525:GTP binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
248339_at AT5G52520	0.634	2.75e-171	0.8	step: proline-tRNA ligase GO:0005737:cytoplasm GO:0006435:threonyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0006433:prolyl-tRNA aminoacylation GO:0004829:threonine-tRNA ligase activity GO:0004827:proline-tRNA ligase activity GO:0006418:tRNA aminoacylation for protein translation GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
258475_at AT3G02660	0.524	2.66e-140	0.732	step: hydroxymethylglutaryl-CoA reductase (NADPH) GO:0004420:hydroxymethylglutaryl-CoA reductase (NADPH) activity GO:0006437:tyrosyl-tRNA aminoacylation GO:0004812:tRNA ligase activity GO:0009058:biosynthesis GO:0003723:RNA binding GO:0006418:tRNA aminoacylation for protein translation GO:0004831:tyrosine-tRNA ligase activity GO:0005524:ATP binding GO:0009507:chloroplast
255328_at AT4G04350	0.651	7.94e-161	0.779	step: homoaconitate hydratase//leucine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0004409:homoaconitate hydratase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0006418:tRNA aminoacylation for protein translation GO:0009085:lysine biosynthesis GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
248634_at AT5G49030	0.71	1.82e-146	0.747	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0008270:zinc ion binding GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
253295_at AT4G33760	0.476	9.75e-130	0.703	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004826:phenylalanine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006810:transport GO:0016020:membrane GO:0006432:phenylalanyl-tRNA aminoacylation GO:0006421:asparaginyl-tRNA aminoacylation GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0005351:sugar porter activity GO:0006412:protein biosynthesis GO:0005524:ATP binding
246509_at AT5G16715	0.601	4.72e-147	0.748	step: valine-tRNA ligase GO:0005737:cytoplasm GO:0004825:methionine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0006431:methionyl-tRNA aminoacylation GO:0004822:isoleucine-tRNA ligase activity GO:0004823:leucine-tRNA ligase activity GO:0008270:zinc ion binding GO:0006438:valyl-tRNA aminoacylation GO:0006428:isoleucyl-tRNA aminoacylation GO:0006429:leucyl-tRNA aminoacylation GO:0005576:extracellular region GO:0008237:metallopeptidase activity GO:0006418:tRNA aminoacylation for protein translation GO:0004832:valine-tRNA ligase activity GO:0006508:proteolysis and peptidolysis GO:0006412:protein biosynthesis GO:0005524:ATP binding GO:0009507:chloroplast
256963_at AT3G13490	0.471	6.96e-139	0.728	step: asparagine-tRNA ligase GO:0005737:cytoplasm GO:0004824:lysine-tRNA ligase activity GO:0004812:tRNA ligase activity GO:0004815:aspartate-tRNA ligase activity GO:0006430:lysyl-tRNA aminoacylation GO:0004816:asparagine-tRNA ligase activity GO:0006421:asparaginyl-tRNA aminoacylation GO:0006422:aspartyl-tRNA aminoacylation GO:0003676:nucleic acid binding GO:0006418:tRNA aminoacylation for protein translation GO:0006350:transcription GO:0003899:DNA-directed RNA polymerase activity GO:0005524:ATP binding
251573_at AT3G58140	0.56	1.87e-172