PCL results for AraCyc pathway: gluconeogenesis

KEY: Each row represents a single gene that was identified by PLC (pathway-level co-expression) as being co-expressed with two or more genes in this pathway. Column 2 lists probe sets/genes that are co-expressed with annotated pathway members in column 3. Here, co-expression is defined as a regression p value less than 1e-120. If a gene in the first column is shaded blue, then it is already known to be a member of the pathway.

rank

probe set:gene id

co-expressed with

250255_at : AT5G13730
GO:0003700:transcription factor activity
GO:0005622:intracellular
GO:0006355:regulation of transcription, DNA-dependent
GO:0006352:transcription initiation
GO:0003677:DNA binding
GO:0003899:DNA-directed RNA polymerase activity
GO:0016987:sigma factor activity
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.11	3.05e-141	0.734	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
253971_at AT4G26530	1.09	2.52e-130	0.705	step: fructose-bisphosphate aldolase GO:0004332:fructose-bisphosphate aldolase activity GO:0008372:cellular component unknown GO:0006096:glycolysis
250498_at AT5G09660	1.15	3.48e-153	0.762	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.24	5.76e-173	0.803	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.778	2.43e-177	0.811	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.21	1.79e-143	0.739	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.474	1.14e-124	0.688	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.757	1.03e-125	0.692	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.04	9.84e-125	0.689	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.731	5.57e-139	0.728	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.26	6.05e-151	0.757	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.21	3.26e-171	0.8	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

262612_at : AT1G14150
GO:0030095:photosystem II (sensu Viridiplantae)
GO:0015979:photosynthesis
GO:0005509:calcium ion binding
GO:0009543:thylakoid lumen (sensu Viridiplantae)

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	0.954	1.62e-190	0.833	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
253971_at AT4G26530	0.891	6.56e-137	0.723	step: fructose-bisphosphate aldolase GO:0004332:fructose-bisphosphate aldolase activity GO:0008372:cellular component unknown GO:0006096:glycolysis
250498_at AT5G09660	0.996	1.28e-229	0.885	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.05	1.06e-242	0.899	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.662	5.8e-254	0.909	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.04	1.22e-196	0.843	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.632	3.26e-146	0.746	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.876	6.85e-153	0.762	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.583	2.96e-134	0.716	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.06	1.37e-188	0.83	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.02	9.46e-234	0.89	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

253849_at : AT4G28080
GO:0003887:DNA-directed DNA polymerase activity
GO:0040008:regulation of growth
GO:0006260:DNA replication
GO:0005739:mitochondrion
GO:0003677:DNA binding

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.08	4.4e-162	0.782	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.04	1.33e-131	0.708	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.15	6.71e-169	0.795	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.712	4.84e-157	0.771	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.18	9.91e-168	0.793	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.462	1.47e-144	0.742	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.728	6.8e-138	0.725	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.995	3.84e-136	0.721	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.747	6.82e-210	0.861	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.22	2.8e-174	0.806	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.13	6.52e-172	0.801	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

264037_at : AT2G03750
GO:0000004:biological process unknown
GO:0008146:sulfotransferase activity
GO:0012505:endomembrane system

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.14	2.14e-153	0.763	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.13	6.28e-141	0.733	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.24	1.48e-173	0.804	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.761	7.84e-158	0.773	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.27	8.36e-178	0.812	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.483	6.97e-133	0.712	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.788	2.03e-145	0.744	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.05	6.76e-130	0.704	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.75	3.81e-153	0.762	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.29	5.74e-167	0.792	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.2	2.09e-161	0.78	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

258055_at : AT3G16250
GO:0005506:iron ion binding
GO:0009055:electron carrier activity
GO:0005489:electron transporter activity
GO:0006118:electron transport
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	0.895	2.01e-182	0.82	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	0.891	9.67e-167	0.791	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	0.985	4.11e-227	0.882	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.608	9.51e-206	0.856	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	0.99	1.16e-202	0.852	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.365	7.17e-130	0.704	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.615	6.51e-166	0.79	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.828	1.34e-152	0.761	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.587	1.83e-176	0.81	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.02	8.87e-205	0.855	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	0.96	8.23e-220	0.874	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

263846_at : AT2G36990
GO:0003700:transcription factor activity
GO:0016987:sigma factor activity
GO:0006355:regulation of transcription, DNA-dependent
GO:0006352:transcription initiation
GO:0003677:DNA binding
GO:0003899:DNA-directed RNA polymerase activity
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.36	2.3e-158	0.774	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.31	3.99e-128	0.699	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.46	6.16e-172	0.801	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.897	5.1e-155	0.767	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.51	2.29e-176	0.809	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.567	9.84e-129	0.7	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.962	4.41e-168	0.794	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.29	4.24e-149	0.753	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.959	3.79e-233	0.889	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.56	2.45e-182	0.82	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.46	3.86e-187	0.828	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

261483_at : AT1G14270
GO:0012505:endomembrane system
GO:0005215:transporter activity
GO:0016021:integral to membrane
GO:0006810:transport
GO:0016740:transferase activity
GO:0008487:prenyl-dependent CAAX protease activity
GO:0008152:metabolism
GO:0006508:proteolysis and peptidolysis
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.56	1.04e-177	0.812	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.51	3.78e-146	0.746	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.68	1.32e-195	0.841	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	1.03	3.85e-173	0.804	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.7	1.86e-184	0.824	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.634	1.32e-127	0.697	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	1.06	1.07e-153	0.764	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.44	3.15e-150	0.756	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	1.06	9.28e-214	0.866	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.75	2.01e-185	0.825	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.62	2.06e-178	0.813	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

252853_at : AT4G39710
GO:0005528:FK506 binding
GO:0006457:protein folding
GO:0003755:peptidyl-prolyl cis-trans isomerase activity
GO:0009543:thylakoid lumen (sensu Viridiplantae)

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.32	1.07e-149	0.754	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.35	1.09e-153	0.764	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.48	5e-198	0.845	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.917	5.19e-185	0.825	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.45	5.89e-156	0.769	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.557	1.4e-126	0.694	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.887	2.12e-126	0.694	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.22	3.47e-127	0.696	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.872	9.93e-151	0.757	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.49	3.23e-159	0.776	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.41	3.25e-171	0.8	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

256796_at : AT3G22210
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0012505:endomembrane system

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	0.995	1.04e-192	0.837	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.01	4.75e-192	0.836	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.06	1e-202	0.852	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.667	1.51e-202	0.851	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.08	1.13e-193	0.838	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.398	6.65e-126	0.692	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.661	8.7e-149	0.752	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.934	1e-170	0.799	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.617	9.78e-144	0.74	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.12	5.95e-201	0.849	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.04	1.15e-204	0.854	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

263142_at : AT1G65230
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.01	1.48e-198	0.846	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
253971_at AT4G26530	0.941	1.34e-138	0.727	step: fructose-bisphosphate aldolase GO:0004332:fructose-bisphosphate aldolase activity GO:0008372:cellular component unknown GO:0006096:glycolysis
250498_at AT5G09660	1.06	1.15e-250	0.906	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.11	1.3e-255	0.91	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.7	1.56e-262	0.916	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.1	5.37e-205	0.855	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.681	3.68e-161	0.78	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.943	6.01e-169	0.796	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.603	1.26e-125	0.691	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.13	6.31e-200	0.848	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.08	3.52e-244	0.9	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

249694_at : AT5G35790
GO:0004345:glucose-6-phosphate 1-dehydrogenase activity
GO:0006006:glucose metabolism
GO:0009051:pentose-phosphate shunt, oxidative branch
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.15	5.17e-161	0.78	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.14	1.17e-146	0.747	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.24	2.76e-177	0.811	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.768	2.25e-166	0.79	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.28	8.11e-187	0.827	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.475	2.34e-125	0.691	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.826	9.86e-185	0.824	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.1	9.25e-160	0.777	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.754	3.7e-159	0.776	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.33	1.44e-200	0.849	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.21	3.34e-175	0.807	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

261793_at : AT1G16080
GO:0006206:pyrimidine base metabolism
GO:0008677:2-dehydropantoate 2-reductase activity
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.95	3.53e-159	0.776	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.96	1.95e-151	0.758	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	2.11	5.21e-172	0.801	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	1.32	1.37e-173	0.804	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	2.12	4.03e-160	0.778	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.829	1.01e-136	0.722	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	1.29	1.38e-124	0.688	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.8	6.47e-134	0.715	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	1.33	2.63e-188	0.83	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	2.19	1.33e-161	0.781	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	2.07	6.45e-175	0.807	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

266285_at : AT2G29180
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.33	1.95e-154	0.765	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.28	6.17e-125	0.689	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.41	1.43e-155	0.768	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.877	5.18e-148	0.75	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.46	2.68e-161	0.78	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.555	5.5e-124	0.686	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.898	1.66e-131	0.708	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.25	1.98e-138	0.727	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.908	3.1e-181	0.818	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.53	1.2e-175	0.808	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.4	9.72e-166	0.789	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

261788_at : AT1G15980
GO:0016740:transferase activity
GO:0008152:metabolism
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	0.995	3.35e-242	0.898	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
253971_at AT4G26530	0.87	8.59e-123	0.683	step: fructose-bisphosphate aldolase GO:0004332:fructose-bisphosphate aldolase activity GO:0008372:cellular component unknown GO:0006096:glycolysis
250498_at AT5G09660	1.02	1.42e-260	0.914	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.07	1.66e-280	0.929	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.678	0	0.943	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.07	1.1e-221	0.876	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.651	4.66e-163	0.784	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.915	3.35e-184	0.823	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.61	1.07e-159	0.777	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.1	2.9e-234	0.89	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.05	1.08e-271	0.923	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

248962_at : AT5G45680
GO:0005528:FK506 binding
GO:0006457:protein folding
GO:0003755:peptidyl-prolyl cis-trans isomerase activity
GO:0009543:thylakoid lumen (sensu Viridiplantae)

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.31	2.84e-206	0.857	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.3	1.16e-188	0.83	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.4	2.5e-224	0.879	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.878	8.71e-220	0.874	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.4	2.65e-189	0.832	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.513	1.07e-122	0.683	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.85	6.93e-143	0.738	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.21	3.77e-166	0.79	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.85	1.2e-190	0.834	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.47	1.04e-216	0.87	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.38	3e-226	0.881	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

254198_at : AT4G24090
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	2.36	6.49e-159	0.775	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	2.34	3.19e-144	0.741	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	2.56	2.12e-179	0.815	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	1.56	1.72e-154	0.765	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	2.6	4.66e-173	0.803	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.972	2.08e-122	0.682	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	1.61	6.57e-144	0.741	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	2.21	4e-143	0.739	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	1.59	5.79e-178	0.812	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	2.69	1.04e-178	0.814	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	2.49	1.85e-171	0.8	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

262878_at : AT1G64770
GO:0006012:galactose metabolism
GO:0004034:aldose 1-epimerase activity
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.64	6.09e-171	0.799	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.64	6.84e-162	0.781	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.76	4.74e-184	0.823	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	1.09	5.12e-171	0.8	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.8	5.85e-180	0.816	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.665	4.46e-122	0.681	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	1.09	7.86e-136	0.72	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.49	3.63e-134	0.715	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	1.07	2.2e-164	0.786	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.82	2.25e-167	0.792	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.73	8.39e-189	0.831	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

247889_at : AT5G57930
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.66	3.23e-159	0.776	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.68	3.46e-156	0.769	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.81	5.49e-178	0.812	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	1.1	8.57e-158	0.773	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.82	1.91e-164	0.787	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.685	5.51e-122	0.68	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	1.15	1.72e-150	0.756	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.58	4.14e-152	0.76	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	1.12	1.43e-178	0.813	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.89	3.13e-174	0.806	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.77	1.13e-179	0.815	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

251353_at : AT3G61080
GO:0000004:biological process unknown
GO:0016301:kinase activity
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.67	2.8e-183	0.822	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
253971_at AT4G26530	1.53	7.1e-122	0.68	step: fructose-bisphosphate aldolase GO:0004332:fructose-bisphosphate aldolase activity GO:0008372:cellular component unknown GO:0006096:glycolysis
250498_at AT5G09660	1.74	9.82e-214	0.866	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.84	8.16e-226	0.881	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	1.13	2.81e-197	0.844	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.83	9.79e-189	0.831	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	1.11	3.67e-141	0.734	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.55	2.68e-154	0.765	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	1.02	5.56e-130	0.704	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.85	2.54e-176	0.809	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.78	1.5e-208	0.86	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

249230_at : AT5G42070
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.47	4.75e-160	0.777	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.44	3.79e-141	0.734	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.59	1.12e-175	0.808	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.959	1.9e-148	0.752	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.63	1.45e-180	0.817	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.603	8.63e-122	0.68	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.99	1.55e-136	0.722	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.35	4.39e-135	0.718	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.993	1.47e-181	0.819	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.67	1.83e-175	0.808	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.56	5e-181	0.818	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

251243_at : AT3G61870
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009706:chloroplast inner membrane

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.12	1.69e-236	0.892	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.1	4.08e-188	0.83	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.21	4.56e-272	0.923	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.755	3.61e-256	0.911	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.23	5.64e-246	0.902	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
253966_at AT4G26520	0.431	1.92e-121	0.679	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.772	9.2e-207	0.857	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.04	1.23e-185	0.826	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.714	1.16e-187	0.829	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.26	1.15e-240	0.897	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.18	4.05e-260	0.914	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

248624_at : AT5G48790
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.14	2.82e-162	0.782	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
253971_at AT4G26530	1.07	2.32e-121	0.679	step: fructose-bisphosphate aldolase GO:0004332:fructose-bisphosphate aldolase activity GO:0008372:cellular component unknown GO:0006096:glycolysis
250498_at AT5G09660	1.22	6.18e-209	0.86	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.28	2.65e-221	0.876	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.805	9.13e-222	0.876	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.26	3.37e-177	0.811	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.746	2.58e-121	0.678	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.06	2.02e-140	0.732	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.705	6.66e-123	0.683	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.27	2.49e-158	0.774	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.21	8.76e-181	0.817	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

262168_at : AT1G74730
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.22	1.54e-255	0.91	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.18	3.49e-187	0.828	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.29	1.44e-255	0.91	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.792	1.14e-218	0.873	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.33	1.51e-268	0.921	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.834	5.67e-217	0.871	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.13	6.83e-202	0.851	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.78	1.64e-209	0.861	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.37	3.87e-288	0.934	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.28	8.84e-280	0.929	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

259193_at : AT3G01480
GO:0006457:protein folding
GO:0003755:peptidyl-prolyl cis-trans isomerase activity
GO:0009543:thylakoid lumen (sensu Viridiplantae)

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.26	4.38e-226	0.881	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.26	2.34e-202	0.851	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.37	1.07e-279	0.929	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.854	9.32e-263	0.916	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.36	1.04e-222	0.877	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.852	2.86e-182	0.82	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.19	9.02e-198	0.845	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.82	9.97e-207	0.857	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.43	6.93e-257	0.911	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.34	9.76e-271	0.922	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

252409_at : AT3G47650
GO:0006457:protein folding
GO:0031072:heat shock protein binding
GO:0051082:unfolded protein binding
GO:0008152:metabolism
GO:0009507:chloroplast
GO:0016491:oxidoreductase activity

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.24	9.91e-251	0.906	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.2	7.5e-181	0.817	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.3	3.92e-226	0.881	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.803	3.53e-206	0.857	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.33	1.64e-227	0.883	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.847	8.06e-207	0.857	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.18	2.65e-236	0.892	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.791	2.58e-197	0.844	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.4	2.71e-273	0.924	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.3	2.37e-261	0.915	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

255572_at : AT4G01050
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.18	1.25e-247	0.903	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.15	6.59e-197	0.843	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.27	1.37e-278	0.928	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.78	6.32e-238	0.894	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.29	8.74e-269	0.921	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.812	1.57e-219	0.874	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.11	4.68e-211	0.863	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.738	1.82e-178	0.813	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.32	1.16e-262	0.916	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.23	4.37e-263	0.916	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

248449_at : AT5G51110
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.35	5.49e-244	0.9	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.34	1.63e-212	0.865	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.43	5.32e-239	0.895	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.879	1.31e-211	0.864	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.44	3.26e-220	0.874	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.908	3.32e-189	0.831	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.28	3.14e-224	0.879	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.845	7.4e-178	0.812	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.52	6.02e-261	0.915	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.42	4.27e-282	0.93	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

262283_at : AT1G68590
GO:0009536:plastid
GO:0005840:ribosome
GO:0005622:intracellular
GO:0003735:structural constituent of ribosome
GO:0006412:protein biosynthesis
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	0.908	5.55e-245	0.901	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	0.868	1.79e-172	0.802	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	0.946	6.53e-217	0.87	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.582	4.96e-194	0.839	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	0.978	5.35e-231	0.887	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.634	1.04e-237	0.894	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.87	4.57e-241	0.897	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.565	3.23e-173	0.804	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.04	0	0.945	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	0.952	2.32e-266	0.919	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

264839_at : AT1G03630
GO:0015995:chlorophyll biosynthesis
GO:0009507:chloroplast
GO:0016630:protochlorophyllide reductase activity
GO:0016491:oxidoreductase activity

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	0.933	3.46e-216	0.87	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	0.914	1.6e-178	0.813	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1	3.28e-241	0.897	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.619	3.67e-213	0.866	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.01	6.28e-209	0.86	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.627	3.03e-172	0.802	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.868	3.67e-180	0.816	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.613	1.65e-211	0.864	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.06	1.83e-239	0.895	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	0.973	2.31e-223	0.878	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

267430_at : AT2G34860
GO:0031072:heat shock protein binding
GO:0006457:protein folding
GO:0051082:unfolded protein binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.43	7.7e-233	0.889	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.45	8.64e-231	0.886	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.55	4.3e-277	0.927	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.962	1.26e-252	0.908	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.56	1.4e-235	0.892	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.954	3.47e-173	0.804	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.34	8.12e-200	0.848	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.896	3.96e-171	0.8	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.58	9.91e-220	0.874	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.52	2.01e-283	0.931	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

255440_at : AT4G02530
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0009543:thylakoid lumen (sensu Viridiplantae)

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.12	1.75e-210	0.862	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.11	1.43e-180	0.817	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.24	1.21e-290	0.936	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.769	7.19e-256	0.911	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.23	2.79e-225	0.88	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.763	3.24e-175	0.807	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.04	7.73e-171	0.799	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.739	1.13e-205	0.856	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.25	1.18e-209	0.861	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.2	1.11e-246	0.902	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

263676_at : AT1G09340
GO:0006012:galactose metabolism
GO:0006694:steroid biosynthesis
GO:0004043:L-aminoadipate-semialdehyde dehydrogenase activity
GO:0003824:catalytic activity
GO:0009225:nucleotide-sugar metabolism
GO:0051287:NAD binding
GO:0008460:dTDP-glucose 4,6-dehydratase activity
GO:0045226:extracellular polysaccharide biosynthesis
GO:0008831:dTDP-4-dehydrorhamnose reductase activity
GO:0008152:metabolism
GO:0003854:3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0003978:UDP-glucose 4-epimerase activity
GO:0008372:cellular component unknown
GO:0016491:oxidoreductase activity

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	0.946	0	0.943	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	0.95	4.12e-274	0.925	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.01	0	0.946	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.632	0	0.952	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.01	2.09e-250	0.906	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.617	7.32e-181	0.817	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.876	3.2e-220	0.874	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.574	3.57e-170	0.798	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.05	1.8e-275	0.926	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	0.988	0	0.953	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

255719_at : AT1G32080
GO:0015703:chromate transport
GO:0008067:metabotropic glutamate, GABA-B-like receptor activity
GO:0007049:cell cycle
GO:0042626:ATPase activity, coupled to transmembrane movement of substances
GO:0006885:regulation of pH
GO:0001584:rhodopsin-like receptor activity
GO:0005215:transporter activity
GO:0015675:nickel ion transport
GO:0007186:G-protein coupled receptor protein signaling pathway
GO:0005524:ATP binding
GO:0005351:sugar porter activity
GO:0008137:NADH dehydrogenase (ubiquinone) activity
GO:0006810:transport
GO:0015299:solute:hydrogen antiporter activity
GO:0006605:protein targeting
GO:0009401:phosphoenolpyruvate-dependent sugar phosphotransferase system
GO:0015099:nickel ion transporter activity
GO:0042773:ATP synthesis coupled electron transport
GO:0008982:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
GO:0008654:phospholipid biosynthesis
GO:0015109:chromate transporter activity
GO:0009706:chloroplast inner membrane
GO:0004605:phosphatidate cytidylyltransferase activity

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.07	6.13e-214	0.867	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.08	8.25e-211	0.863	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.17	1.71e-262	0.916	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.734	5.88e-275	0.925	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.16	1.48e-211	0.864	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.719	3.01e-170	0.798	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.986	2.3e-170	0.798	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.679	2.57e-173	0.804	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.2	1.96e-219	0.874	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.14	1.18e-251	0.907	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

256468_at : AT1G32550
GO:0005506:iron ion binding
GO:0009055:electron carrier activity
GO:0005489:electron transporter activity
GO:0006118:electron transport
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.56	1.45e-191	0.835	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.54	8.34e-170	0.797	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.72	1.7e-246	0.902	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	1.05	9.45e-204	0.853	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.71	1.94e-204	0.854	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	1.07	1.21e-175	0.808	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.46	3.9e-170	0.798	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	1.04	1.15e-202	0.852	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.77	3.93e-210	0.862	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.66	1.44e-225	0.881	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

255046_at : AT4G09650
GO:0046933:hydrogen-transporting ATP synthase activity, rotational mechanism
GO:0016469:hydrogen-transporting two-sector ATPase complex
GO:0015986:ATP synthesis coupled proton transport
GO:0046961:hydrogen-transporting ATPase activity, rotational mechanism
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.02	3.25e-278	0.928	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1	2.1e-219	0.873	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.08	6.87e-271	0.922	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.671	8.73e-251	0.906	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.08	4.5e-226	0.881	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.663	1.44e-169	0.797	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.945	1.48e-209	0.861	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.627	2.14e-173	0.804	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.14	2.28e-277	0.927	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.06	5.92e-271	0.923	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

262970_at : AT1G75690
GO:0031072:heat shock protein binding
GO:0006457:protein folding
GO:0051082:unfolded protein binding
GO:0009507:chloroplast

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	0.942	7.2e-261	0.915	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	0.936	2.78e-224	0.879	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	0.995	2.98e-252	0.907	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.618	6.04e-235	0.891	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.01	2.39e-236	0.892	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.615	1.81e-168	0.795	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.876	7.6e-206	0.856	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.583	1.62e-173	0.804	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.06	2.78e-277	0.927	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	0.984	9.84e-275	0.925	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

251784_at : AT3G55330
GO:0015979:photosynthesis
GO:0030095:photosystem II (sensu Viridiplantae)
GO:0009654:oxygen evolving complex
GO:0005509:calcium ion binding
GO:0009543:thylakoid lumen (sensu Viridiplantae)

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.05	4.94e-271	0.923	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.04	1.41e-234	0.89	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.11	5.62e-275	0.925	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	0.695	6.27e-263	0.916	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.12	1.66e-229	0.885	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	0.682	8.5e-168	0.793	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	0.977	9.48e-214	0.866	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.652	7.38e-182	0.819	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.17	5.11e-266	0.919	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.1	2.03e-288	0.934	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

251810_at : AT3G55250
GO:0000004:biological process unknown
GO:0005554:molecular function unknown
GO:0005739:mitochondrion

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.49	7.28e-185	0.824	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.48	5e-168	0.794	step: malate dehydrogenase GO:0042579:microbody GO:0006108:malate metabolism GO:0016615:malate dehydrogenase activity GO:0008152:metabolism GO:0006100:tricarboxylic acid cycle intermediate metabolism
251885_at AT3G54050	1.64	1.84e-234	0.89	step: fructose-bisphosphatase//phosphoric ester hydrolase GO:0042578:phosphoric ester hydrolase activity GO:0006000:fructose metabolism GO:0042132:fructose-bisphosphatase activity GO:0005975:carbohydrate metabolism GO:0009507:chloroplast
257699_at AT3G12780	1	2.23e-196	0.842	step: phosphoglycerate kinase GO:0005737:cytoplasm GO:0004618:phosphoglycerate kinase activity GO:0006096:glycolysis GO:0005739:mitochondrion
263761_at AT2G21330	1.64	2.68e-200	0.848	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity
247813_at AT5G58330	1.02	1.76e-167	0.793	step: malate dehydrogenase GO:0016615:malate dehydrogenase activity GO:0005739:mitochondrion GO:0030060:L-malate dehydrogenase activity GO:0006100:tricarboxylic acid cycle intermediate metabolism GO:0006108:malate metabolism GO:0016491:oxidoreductase activity
257807_at AT3G26650	1.4	9.22e-169	0.795	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0006561:proline biosynthesis GO:0006725:aromatic compound metabolism GO:0006006:glucose metabolism GO:0006096:glycolysis GO:0009507:chloroplast
261206_at AT1G12800	0.964	2.28e-168	0.794	step: fructose-bisphosphate aldolase GO:0005840:ribosome GO:0005634:nucleus GO:0008270:zinc ion binding GO:0006412:protein biosynthesis GO:0003735:structural constituent of ribosome GO:0003723:RNA binding GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding GO:0006096:glycolysis GO:0009507:chloroplast
261197_at AT1G12900	1.67	1.49e-193	0.838	step: glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0004365:glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) activity GO:0006561:proline biosynthesis GO:0051287:NAD binding GO:0004735:pyrroline-5-carboxylate reductase activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0004073:aspartate-semialdehyde dehydrogenase activity GO:0006096:glycolysis GO:0009507:chloroplast
259625_at AT1G42970	1.57	1.29e-198	0.846	step: glyceraldehyde-3-phosphate dehydrogenase (NADP+)//glyceraldehyde-3-phosphate dehydrogenase GO:0008943:glyceraldehyde-3-phosphate dehydrogenase activity GO:0008886:glyceraldehyde-3-phosphate dehydrogenase (NADP+) activity GO:0009088:threonine biosynthesis GO:0006006:glucose metabolism GO:0009086:methionine biosynthesis GO:0006096:glycolysis GO:0009507:chloroplast

251883_at : AT3G54210
GO:0003735:structural constituent of ribosome
GO:0006412:protein biosynthesis
GO:0005840:ribosome
GO:0005622:intracellular

probe set,gene	slope	pvalue	rsquared	annotations
252929_at AT4G38970	1.46	7.68e-210	0.861	step: fructose-bisphosphate aldolase GO:0006098:pentose-phosphate shunt GO:0004332:fructose-bisphosphate aldolase activity GO:0003677:DNA binding
250498_at AT5G09660	1.42	8.29e-167	0.791